PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004280
Common NameERF3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 193aa    MW: 22144 Da    PI: 5.7541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55209402PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-44134PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-44135PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.7e-1953102355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ + +g
  Aan004280  53 YRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAYAVRG 102
                9*******.**********44465..**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.43152110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-2952111IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-2252111IPR016177DNA-binding domain
SMARTSM003802.8E-3352116IPR001471AP2/ERF domain
PfamPF008472.7E-1353102IPR001471AP2/ERF domain
CDDcd000187.75E-2853109No hitNo description
PRINTSPR003672.3E-115364IPR001471AP2/ERF domain
PRINTSPR003672.3E-117692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MNRFFYPEIA STNHHVLPFN ENDSEEMLLF GVIADAHYVK QDDCLEQEKE LTYRGVRKRP  60
WGKFAAEIRD STRNGVRVWL GTFDTAEEAA LAYDQAAYAV RGSGTVLNFS EEFVFESLVK  120
MDYKYEEGSS PVLALKRKHT IKRKSMAKKM KKKEDKVVKV ENVVYLEDLG RDYLEELLGL  180
SESCSSNSSS SSW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-2653109359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.62900.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206287.16e-70hypothetical protein PRUPE_ppa016384mg
SwissprotQ8LDC82e-68ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLJ9PVZ81e-141J9PVZ8_ARTAN; AP2-ERF transcription factor
STRINGscaffold_302806.12e-66(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-44ethylene response factor 1
Publications ? help Back to Top
  1. Lu X, et al.
    Characterization of a novel ERF transcription factor in Artemisia annua and its induction kinetics after hormones and stress treatments.
    Mol. Biol. Rep., 2012. 39(10): p. 9521-7
    [PMID:22714923]